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Efficient Prior Sensitivity and Tipping-point Analysis for Medical Research: Revisiting Sampling Importance Resampling

arXiv Stat
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Abstract

Bayesian methods have received increasing attention in medical research, where sensitivity analysis of prior distributions is essential.

Such analyses typically require the evaluation of the posterior distribution of a parameter under multiple alternative prior settings.

When the posterior distribution of the parameter of interest cannot be derived analytically, the standard approach is to re-fit the model using Markov chain Monte Carlo (MCMC) for each setting, which incurs substantial computational costs.

This issue is particularly relevant in tipping-point analysis, in which the posterior must be evaluated across gradually changing degrees of borrowing.

Sampling-importance resampling (SIR) provides an efficient alternative by approximating posterior samples under new settings without MCMC re-fitting.

Despite its potential computational advantages, the practical performance of SIR in repeated prior-sensitivity analyses, including tipping-point analysis, and in complex Bayesian models used in medical research has not been sufficiently illustrated.

In this study, we illustrate the practical utility of SIR through two case studies: one involving tipping-point analysis under external data borrowing and another involving sensitivity analysis for a Bayesian nonparametric model in meta-analysis.

In both examples, SIR substantially reduced computation time and produced posterior summaries similar to those obtained by MCMC re-fitting.

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