Rethinking Sampling Strategy in Link Prediction

Computer Science > Social and Information Networks [Submitted on 18 Jun 2026] Title:Rethinking Sampling Strategy in Link Prediction View PDF HTML (experimental)Abstract:Many real-world networks are incomplete, making link prediction a fundamental challenge in network science. To train parameters and evaluate algorithms, observed links are usually divided into three subsets, namely training, validation, and probe sets. This division implicitly involves two sampling processes: first-stage sampling yields the probe set and second-stage sampling obtains the variation set. To date, our understanding of how these two sampling processes affect algorithm performance remains quite limited. To address this issue, we propose a sampling scheme called $\beta$-sampling, where the sampling probability of a link is proportional to the product of the degrees of its two endpoints raised to the power of $\beta$. Experiments on 45 real-world networks reveal that the structural characteristics of missing links, as simulated via varying probe sets, substantially impact prediction accuracy. When missing links tend to connect high-degree nodes, such links can be predicted accurately with ease. Furthermore, even with a fixed probe set, second-stage sampling still exerts a significant influence on prediction accuracy. Notably, the optimal second-stage sampling strategy differs from \textit{random sampling} (which randomly selects links to form the validation set) and \textit{consistent sampling} (which guarantees that links in the validation and probe sets share identical structural characteristics). Current browse context: cs.SI References & Citations Loading... Bibliographic and Citation Tools Bibliographic Explorer (What is the Explorer?) Connected Papers (What is Connected Papers?) Litmaps (What is Litmaps?) scite Smart Citations (What are Smart Citations?) Code, Data and Media Associated with this Article alphaXiv (What is alphaXiv?) CatalyzeX Code Finder for Papers (What is CatalyzeX?) DagsHub (What is DagsHub?) Gotit.pub (What is GotitPub?) Hugging Face (What is Huggingface?) ScienceCast (What is ScienceCast?) Demos Recommenders and Search Tools Influence Flower (What are Influence Flowers?) CORE Recommender (What is CORE?) arXivLabs: experimental projects with community collaborators arXivLabs is a framework that allows collaborators to develop and share new arXiv features directly on our website. Both individuals and organizations that work with arXivLabs have embraced and accepted our values of openness, community, excellence, and user data privacy. arXiv is committed to these values and only works with partners that adhere to them. Have an idea for a project that will add value for arXiv's community? Learn more about arXivLabs.